Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_104106 | Not Available | Positive | 3142343 - 3142744 | 15494.4 |
| hypothetical protein | SAMN05421820_104107 | Not Available | Negative | 3142767 - 3143228 | 17124.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421820_104108 | Not Available | Negative | 3143444 - 3144712 | 46548.4 |
| agmatine deiminase | SAMN05421820_104109 | Not Available | Negative | 3144920 - 3146053 | 41901.8 |
| arac family transcriptional regulator | SAMN05421820_104110 | Not Available | Negative | 3146134 - 3146970 | 31607.8 |
| hypothetical protein | SAMN05421820_104111 | Not Available | Positive | 3147146 - 3147301 | 5630.07 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421820_104112 | Not Available | Positive | 3147475 - 3148530 | 38653.1 |
| peroxiredoxin, ohr subfamily | SAMN05421820_104113 | Not Available | Positive | 3148560 - 3149012 | 15339.2 |
| histidine kinase | SAMN05421820_104114 | Not Available | Positive | 3149189 - 3150208 | 38970.9 |
| dna-binding response regulator, lytr/algr family | SAMN05421820_104115 | Not Available | Positive | 3150189 - 3150950 | 29228.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

