Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | SAMN05421820_10436 | Not Available | Positive | 3053326 - 3055446 | 76987.0 |
| l-rhamnose isomerase / sugar isomerase | SAMN05421820_10437 | Not Available | Positive | 3055458 - 3056732 | 47557.5 |
| sugar (pentulose or hexulose) kinase | SAMN05421820_10438 | Not Available | Positive | 3056736 - 3058145 | 52788.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_10439 | Not Available | Positive | 3058363 - 3061488 | 112443.0 |
| starch-binding associating with outer membrane | SAMN05421820_10440 | Not Available | Positive | 3061507 - 3063024 | 55818.0 |
| alpha-l-rhamnosidase | SAMN05421820_10441 | Not Available | Positive | 3063232 - 3065916 | 100093.0 |
| elongation factor p | SAMN05421820_10442 | Not Available | Positive | 3066045 - 3066635 | 21870.2 |
| conserved hypothetical protein (putative transposase or invertase) | SAMN05421820_10443 | Not Available | Negative | 3066710 - 3067597 | 34121.0 |
| hypothetical protein | SAMN05421820_10444 | Not Available | Negative | 3067690 - 3067788 | 3712.54 |
| kynurenine formamidase | SAMN05421820_10445 | Not Available | Positive | 3067950 - 3068723 | 29320.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

