Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase primary sigma factor | SAMN05421820_103805 | Not Available | Negative | 2980339 - 2981199 | 32641.5 |
| phosphoserine aminotransferase apoenzyme | SAMN05421820_103806 | Not Available | Negative | 2981196 - 2982305 | 41100.2 |
| dna-binding transcriptional regulator, lrp family | SAMN05421820_103807 | Not Available | Positive | 2982610 - 2983071 | 17779.4 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN05421820_103808 | Not Available | Positive | 2983247 - 2984221 | 36364.4 |
| uncharacterized iron-regulated membrane protein | SAMN05421820_103809 | Not Available | Negative | 2984202 - 2985542 | 49479.7 |
| small subunit ribosomal protein s1 | SAMN05421820_103810 | Not Available | Positive | 2985920 - 2987854 | 71881.3 |
| hexosaminidase | SAMN05421820_103811 | Not Available | Positive | 2987945 - 2989555 | 61309.8 |
| hypothetical protein | SAMN05421820_103812 | Not Available | Positive | 2989624 - 2990148 | 19490.9 |
| membrane protease ydil, caax protease family | SAMN05421820_103813 | Not Available | Positive | 2990248 - 2990901 | 25428.7 |
| predicted thiol-disulfide oxidoreductase yuxk, dcc family | SAMN05421820_103814 | Not Available | Negative | 2990906 - 2991313 | 15663.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

