Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase | SAMN05421820_103795 | Not Available | Positive | 2969617 - 2970297 | 25816.7 |
| hypothetical protein | SAMN05421820_103796 | Not Available | Negative | 2970236 - 2970391 | 5734.01 |
| dna-binding transcriptional regulator, acrr family | SAMN05421820_103797 | Not Available | Positive | 2970551 - 2971138 | 23030.6 |
| membrane fusion protein, multidrug efflux system | SAMN05421820_103798 | Not Available | Positive | 2971169 - 2972329 | 41013.3 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05421820_103799 | Not Available | Positive | 2972339 - 2975515 | 114829.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05421820_103800 | Not Available | Positive | 2975538 - 2976944 | 51275.1 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421820_103801 | Not Available | Positive | 2977098 - 2977781 | 26095.5 |
| signal transduction histidine kinase | SAMN05421820_103802 | Not Available | Positive | 2977788 - 2979113 | 50839.8 |
| hypothetical protein | SAMN05421820_103803 | Not Available | Positive | 2979192 - 2979398 | 6975.67 |
| protein of unknown function | SAMN05421820_103804 | Not Available | Positive | 2979504 - 2980334 | 31244.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

