Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05421820_103755 | Not Available | Positive | 2924082 - 2925551 | 55889.4 |
| fasciclin domain-containing protein | SAMN05421820_103756 | Not Available | Positive | 2925569 - 2926258 | 26206.4 |
| delta-60 repeat domain-containing protein | SAMN05421820_103757 | Not Available | Positive | 2926304 - 2927923 | 57772.9 |
| conserved hypothetical protein (putative transposase or invertase) | SAMN05421820_103758 | Not Available | Negative | 2928017 - 2929033 | 38950.6 |
| hypothetical protein | SAMN05421820_103759 | Not Available | Positive | 2929115 - 2929408 | 11296.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421820_103760 | Not Available | Positive | 2929501 - 2930196 | 25207.0 |
| hypothetical protein | SAMN05421820_103761 | Not Available | Negative | 2930337 - 2931662 | 48313.1 |
| hypothetical protein | SAMN05421820_103762 | Not Available | Negative | 2931970 - 2932377 | 15845.0 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421820_103763 | Not Available | Negative | 2932390 - 2934192 | 67401.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_103764 | Not Available | Positive | 2934426 - 2935016 | 23144.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

