Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyproline epimerase | SAMN05421820_103735 | Not Available | Negative | 2894926 - 2895927 | 36517.6 |
| nadp-dependent aldehyde dehydrogenase | SAMN05421820_103736 | Not Available | Negative | 2895927 - 2897465 | 54750.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05421820_103737 | Not Available | Negative | 2897477 - 2898394 | 33661.0 |
| acetyl esterase/lipase | SAMN05421820_103738 | Not Available | Negative | 2898559 - 2899461 | 33167.4 |
| arac-type dna-binding protein | SAMN05421820_103739 | Not Available | Negative | 2899634 - 2900548 | 35019.0 |
| starch-binding associating with outer membrane | SAMN05421820_103740 | Not Available | Negative | 2900658 - 2902436 | 66036.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_103741 | Not Available | Negative | 2902448 - 2905924 | 127783.0 |
| fecr protein | SAMN05421820_103742 | Not Available | Negative | 2906165 - 2907301 | 43206.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_103743 | Not Available | Negative | 2907370 - 2907933 | 21711.3 |
| hypothetical protein | SAMN05421820_103744 | Not Available | Positive | 2908440 - 2909243 | 29572.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

