Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase | SAMN05421820_103715 | Not Available | Negative | 2870419 - 2871264 | 31986.6 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN05421820_103716 | Not Available | Negative | 2871265 - 2872296 | 39074.6 |
| 1-aminocyclopropane-1-carboxylate deaminase | SAMN05421820_103717 | Not Available | Positive | 2872649 - 2873524 | 32461.2 |
| methyltransferase domain-containing protein | SAMN05421820_103718 | Not Available | Positive | 2873528 - 2874319 | 29952.9 |
| hypothetical protein | SAMN05421820_103719 | Not Available | Positive | 2874489 - 2874623 | 5112.11 |
| ricin-type beta-trefoil lectin domain-like | SAMN05421820_103720 | Not Available | Positive | 2874636 - 2876294 | 59414.9 |
| hypothetical protein | SAMN05421820_103721 | Not Available | Positive | 2876499 - 2876645 | 5613.84 |
| uncharacterized conserved protein, implicated in type vi secretion and phage assembly | SAMN05421820_103722 | Not Available | Positive | 2876767 - 2878575 | 67321.5 |
| hypothetical protein | SAMN05421820_103723 | Not Available | Positive | 2878591 - 2879484 | 34138.6 |
| protein of unknown function | SAMN05421820_103724 | Not Available | Positive | 2879501 - 2879986 | 17500.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

