Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative endopeptidase | SAMN05421820_103695 | Not Available | Positive | 2851696 - 2853729 | 75679.3 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN05421820_103696 | Not Available | Negative | 2853790 - 2854125 | 12776.5 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | SAMN05421820_103697 | Not Available | Positive | 2854226 - 2854888 | 24346.0 |
| predicted oxidoreductase | SAMN05421820_103698 | Not Available | Positive | 2854981 - 2856000 | 37868.7 |
| predicted purr-regulated permease perm | SAMN05421820_103699 | Not Available | Positive | 2856122 - 2857237 | 41504.7 |
| hypothetical protein | SAMN05421820_103700 | Not Available | Positive | 2857242 - 2857442 | 7271.03 |
| xtp/ditp diphosphohydrolase | SAMN05421820_103701 | Not Available | Positive | 2857502 - 2858308 | 30736.3 |
| atp-dependent rna helicase rhle | SAMN05421820_103702 | Not Available | Negative | 2858379 - 2859680 | 48084.6 |
| hypothetical protein | SAMN05421820_103703 | Not Available | Positive | 2859784 - 2860542 | 29335.5 |
| dinb superfamily protein | SAMN05421820_103704 | Not Available | Positive | 2860550 - 2861092 | 20765.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

