Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase, trmh family | SAMN05421820_103655 | Not Available | Positive | 2801459 - 2802244 | 29019.2 |
| Trna-cys | Not Available | Not Available | Positive | 2802293 - 2802363 | Not Available |
| hypothetical protein | SAMN05421820_103657 | Not Available | Positive | 2802404 - 2802580 | 6569.07 |
| dihydroorotate oxidase a | SAMN05421820_103658 | Not Available | Negative | 2802684 - 2803712 | 38290.4 |
| atp-binding cassette, subfamily f, member 3 | SAMN05421820_103659 | Not Available | Positive | 2803954 - 2805867 | 71976.5 |
| protein of unknown function | SAMN05421820_103660 | Not Available | Positive | 2805825 - 2807138 | 50319.1 |
| alpha-amylase | SAMN05421820_103661 | Not Available | Negative | 2807141 - 2808631 | 57257.3 |
| membrane-associated phospholipid phosphatase | SAMN05421820_103662 | Not Available | Positive | 2808769 - 2810157 | 51352.6 |
| acyl-coa hydrolase | SAMN05421820_103663 | Not Available | Positive | 2810221 - 2810742 | 19235.2 |
| nhap-type na+/h+ or k+/h+ antiporter | SAMN05421820_103664 | Not Available | Positive | 2810784 - 2811977 | 44034.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

