Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type antimicrobial peptide transport system, permease component | SAMN05421820_103635 | Not Available | Positive | 2780679 - 2783054 | 87943.8 |
| glycosyltransferase sugar-binding region containing dxd motif-containing protein | SAMN05421820_103636 | Not Available | Negative | 2783040 - 2784011 | 37929.9 |
| dihydroxyacetone kinase | SAMN05421820_103637 | Not Available | Positive | 2784234 - 2785862 | 57677.6 |
| hypothetical protein | SAMN05421820_103638 | Not Available | Positive | 2785865 - 2786092 | 8453.5 |
| doxx protein | SAMN05421820_103639 | Not Available | Positive | 2786173 - 2786604 | 16970.2 |
| nadph-dependent ferric siderophore reductase, contains fad-binding and sip domains | SAMN05421820_103640 | Not Available | Positive | 2786654 - 2787376 | 27452.2 |
| phnb protein | SAMN05421820_103641 | Not Available | Negative | 2787382 - 2787801 | 15234.3 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN05421820_103642 | Not Available | Positive | 2787930 - 2788910 | 37117.6 |
| arac-type dna-binding protein | SAMN05421820_103643 | Not Available | Positive | 2788922 - 2789710 | 30044.3 |
| predicted amidohydrolase | SAMN05421820_103644 | Not Available | Positive | 2789834 - 2790784 | 35333.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

