Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | SAMN05421820_103615 | Not Available | Negative | 2757992 - 2759413 | 52822.9 |
| hypothetical protein | SAMN05421820_103616 | Not Available | Positive | 2759587 - 2759832 | 9105.76 |
| uncharacterized membrane protein | SAMN05421820_103617 | Not Available | Positive | 2759829 - 2760518 | 25836.3 |
| dna-binding response regulator, lytr/algr family | SAMN05421820_103618 | Not Available | Negative | 2760525 - 2761259 | 28247.6 |
| histidine kinase | SAMN05421820_103619 | Not Available | Negative | 2761308 - 2762321 | 39665.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421820_103620 | Not Available | Positive | 2762523 - 2764940 | 90307.4 |
| hypothetical protein | SAMN05421820_103621 | Not Available | Negative | 2765024 - 2765539 | 19228.2 |
| hypothetical protein | SAMN05421820_103622 | Not Available | Positive | 2765596 - 2766690 | 39886.9 |
| magnesium transporter | SAMN05421820_103623 | Not Available | Negative | 2766756 - 2768129 | 50806.7 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421820_103624 | Not Available | Negative | 2768450 - 2769715 | 47930.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

