Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kdo2-lipid iv(a) lauroyltransferase | SAMN05421820_103605 | Not Available | Positive | 2746802 - 2747698 | 34819.5 |
| lactoylglutathione lyase | SAMN05421820_103606 | Not Available | Negative | 2747695 - 2748162 | 17575.0 |
| n-acetylglutamate synthase, gnat family | SAMN05421820_103607 | Not Available | Negative | 2748171 - 2748629 | 17627.8 |
| hypothetical protein | SAMN05421820_103608 | Not Available | Positive | 2748760 - 2749404 | 23798.2 |
| dnaj domain-containing protein | SAMN05421820_103609 | Not Available | Negative | 2749623 - 2750069 | 17043.4 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421820_103610 | Not Available | Positive | 2750277 - 2750960 | 25476.1 |
| signal transduction histidine kinase | SAMN05421820_103611 | Not Available | Positive | 2750982 - 2752340 | 51394.4 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN05421820_103612 | Not Available | Positive | 2752399 - 2753667 | 48001.7 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN05421820_103613 | Not Available | Positive | 2753673 - 2754767 | 40002.4 |
| cobalt-zinc-cadmium resistance protein czca | SAMN05421820_103614 | Not Available | Positive | 2754797 - 2757931 | 115951.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

