Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lanthionine synthetase c-like protein | SAMN05421820_101214 | Not Available | Positive | 269354 - 270511 | 42597.9 |
| nadph:quinone reductase | SAMN05421820_101215 | Not Available | Positive | 270512 - 271633 | 41416.0 |
| peptidase family s41 | SAMN05421820_101216 | Not Available | Negative | 271627 - 272616 | 37712.3 |
| alpha-galactosidase | SAMN05421820_101217 | Not Available | Negative | 272714 - 274906 | 83682.4 |
| hypothetical protein | SAMN05421820_101218 | Not Available | Positive | 275065 - 276378 | 48834.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_101219 | Not Available | Positive | 276653 - 279781 | 114641.0 |
| starch-binding associating with outer membrane | SAMN05421820_101220 | Not Available | Positive | 279790 - 281610 | 68099.4 |
| protein of unknown function | SAMN05421820_101221 | Not Available | Positive | 281623 - 282597 | 35534.1 |
| f5/8 type c domain-containing protein | SAMN05421820_101222 | Not Available | Positive | 282608 - 284239 | 60264.9 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN05421820_101223 | Not Available | Positive | 284261 - 285163 | 33555.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

