Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, chemotaxis family, cheb/cher fusion protein | SAMN05421820_103565 | Not Available | Negative | 2689544 - 2692519 | 113317.0 |
| hypothetical protein | SAMN05421820_103566 | Not Available | Positive | 2692634 - 2692786 | 5913.22 |
| adp-heptose:lps heptosyltransferase | SAMN05421820_103567 | Not Available | Positive | 2692804 - 2693808 | 37727.7 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421820_103568 | Not Available | Negative | 2693788 - 2694444 | 24200.8 |
| cold shock protein (beta-ribbon, cspa family) | SAMN05421820_103569 | Not Available | Positive | 2694691 - 2694885 | 7054.55 |
| hypothetical protein | SAMN05421820_103570 | Not Available | Positive | 2695096 - 2695575 | 17392.0 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN05421820_103571 | Not Available | Negative | 2695579 - 2696013 | 16389.2 |
| thioredoxin-related protein | SAMN05421820_103572 | Not Available | Negative | 2696239 - 2697474 | 46317.6 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN05421820_103573 | Not Available | Positive | 2698035 - 2699129 | 42527.1 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN05421820_103574 | Not Available | Negative | 2699249 - 2700394 | 42136.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

