Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-2,4-diaminobutyrate decarboxylase | SAMN05421820_103525 | Not Available | Negative | 2633979 - 2635502 | 56187.1 |
| iron complex outermembrane recepter protein | SAMN05421820_103526 | Not Available | Negative | 2635590 - 2638202 | 95602.5 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN05421820_103527 | Not Available | Negative | 2638284 - 2639249 | 36123.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_103528 | Not Available | Negative | 2639376 - 2639921 | 21503.6 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN05421820_103529 | Not Available | Positive | 2640191 - 2641180 | 38651.5 |
| glycosyl hydrolase family 88 | SAMN05421820_103530 | Not Available | Negative | 2641239 - 2642504 | 47869.8 |
| starch-binding associating with outer membrane | SAMN05421820_103531 | Not Available | Negative | 2642536 - 2644353 | 66444.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_103532 | Not Available | Negative | 2644371 - 2647490 | 114230.0 |
| chondroitin ac lyase | SAMN05421820_103533 | Not Available | Negative | 2647609 - 2649720 | 79128.3 |
| arylsulfatase a | SAMN05421820_103534 | Not Available | Negative | 2649737 - 2651173 | 53237.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

