Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_103455 | Not Available | Positive | 2540820 - 2544083 | 120891.0 |
| susd family protein | SAMN05421820_103456 | Not Available | Positive | 2544118 - 2545911 | 67558.1 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | SAMN05421820_103457 | Not Available | Positive | 2546020 - 2546865 | 31111.8 |
| alpha-1,2-mannosidase, putative | SAMN05421820_103458 | Not Available | Negative | 2546943 - 2549240 | 86573.8 |
| hypothetical protein | SAMN05421820_103459 | Not Available | Negative | 2549728 - 2550261 | 20630.7 |
| cysteine desulfurase | SAMN05421820_103460 | Not Available | Negative | 2550274 - 2551428 | 42361.4 |
| phosphomannomutase | SAMN05421820_103461 | Not Available | Negative | 2551428 - 2552900 | 53193.3 |
| methyltransferase domain-containing protein | SAMN05421820_103462 | Not Available | Positive | 2552992 - 2553723 | 28782.4 |
| undecaprenyl-diphosphatase | SAMN05421820_103463 | Not Available | Positive | 2553720 - 2554283 | 21499.9 |
| zinc transporter zupt | SAMN05421820_103464 | Not Available | Positive | 2554283 - 2555011 | 26508.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

