Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421820_103435 | Not Available | Positive | 2514427 - 2514708 | 10766.2 |
| putative redox protein | SAMN05421820_103436 | Not Available | Negative | 2514715 - 2515131 | 15332.6 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN05421820_103437 | Not Available | Negative | 2515138 - 2515941 | 29538.4 |
| hypothetical protein | SAMN05421820_103438 | Not Available | Positive | 2516385 - 2516546 | 6390.68 |
| thymidylate synthase | SAMN05421820_103439 | Not Available | Positive | 2516602 - 2517375 | 29294.2 |
| dihydrofolate reductase | SAMN05421820_103440 | Not Available | Positive | 2517372 - 2517857 | 18243.7 |
| secd/secf fusion protein | SAMN05421820_103441 | Not Available | Positive | 2517972 - 2520932 | 107532.0 |
| hypothetical protein | SAMN05421820_103442 | Not Available | Positive | 2521583 - 2521951 | 13998.0 |
| hypothetical protein | SAMN05421820_103443 | Not Available | Negative | 2522072 - 2522305 | 8989.48 |
| rhs repeat-associated core domain-containing protein | SAMN05421820_103444 | Not Available | Negative | 2522309 - 2526409 | 150492.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

