Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421820_103425 | Not Available | Positive | 2500495 - 2501184 | 26585.4 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN05421820_103426 | Not Available | Positive | 2501223 - 2502548 | 48199.1 |
| cystathionine beta-synthase | SAMN05421820_103427 | Not Available | Negative | 2502643 - 2504079 | 53031.7 |
| dna processing protein | SAMN05421820_103428 | Not Available | Negative | 2504130 - 2505248 | 40837.1 |
| 16s rrna (guanine527-n7)-methyltransferase | SAMN05421820_103429 | Not Available | Negative | 2505805 - 2506437 | 23996.9 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05421820_103430 | Not Available | Negative | 2506428 - 2507549 | 42997.9 |
| queuine trna-ribosyltransferase | SAMN05421820_103431 | Not Available | Positive | 2507593 - 2508810 | 45819.5 |
| lipopolysaccharide export system permease protein | SAMN05421820_103432 | Not Available | Positive | 2508811 - 2509914 | 42024.7 |
| eama-like transporter family protein | SAMN05421820_103433 | Not Available | Positive | 2509915 - 2510808 | 33100.6 |
| hypothetical protein | SAMN05421820_103434 | Not Available | Positive | 2511613 - 2514423 | 106434.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

