Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system atp-binding protein | SAMN05421820_103405 | Not Available | Positive | 2477907 - 2478536 | 22912.4 |
| putative abc transport system permease protein | SAMN05421820_103406 | Not Available | Positive | 2478533 - 2479759 | 44590.2 |
| hypothetical protein | SAMN05421820_103407 | Not Available | Positive | 2479817 - 2480254 | 16194.1 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN05421820_103408 | Not Available | Positive | 2480257 - 2480691 | 16399.8 |
| membrane dipeptidase | SAMN05421820_103409 | Not Available | Negative | 2480699 - 2481769 | 39637.9 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05421820_103410 | Not Available | Negative | 2481782 - 2482252 | 16878.6 |
| starch-binding associating with outer membrane | SAMN05421820_103411 | Not Available | Negative | 2482286 - 2483821 | 56421.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_103412 | Not Available | Negative | 2483833 - 2487003 | 115112.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | SAMN05421820_103413 | Not Available | Negative | 2487442 - 2487942 | 17866.9 |
| hypothetical protein | SAMN05421820_103414 | Not Available | Negative | 2487950 - 2489959 | 76642.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

