Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_103345 | Not Available | Negative | 2417978 - 2418838 | 32319.6 |
| hypothetical protein | SAMN05421820_103346 | Not Available | Negative | 2419210 - 2419809 | 22408.0 |
| endonuclease/exonuclease/phosphatase family protein | SAMN05421820_103347 | Not Available | Negative | 2419872 - 2420699 | 32080.4 |
| predicted arabinose efflux permease, mfs family | SAMN05421820_103348 | Not Available | Negative | 2420731 - 2421951 | 45170.9 |
| protein of unknown function (du1801) | SAMN05421820_103349 | Not Available | Negative | 2421962 - 2422303 | 13391.5 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN05421820_103350 | Not Available | Positive | 2422629 - 2425223 | 97068.1 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421820_103351 | Not Available | Positive | 2425354 - 2426052 | 25924.7 |
| opacity protein | SAMN05421820_103352 | Not Available | Positive | 2426145 - 2426801 | 24502.8 |
| mfs transporter, fsr family, fosmidomycin resistance protein | SAMN05421820_103353 | Not Available | Negative | 2426921 - 2428123 | 43283.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_103354 | Not Available | Positive | 2428161 - 2430557 | 90883.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

