Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin 1 | SAMN05421820_103315 | Not Available | Positive | 2384252 - 2384542 | 10855.4 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN05421820_103316 | Not Available | Negative | 2384535 - 2386241 | 65609.8 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN05421820_103317 | Not Available | Negative | 2386256 - 2386666 | 15601.2 |
| hypothetical protein | SAMN05421820_103318 | Not Available | Positive | 2387079 - 2387474 | 13729.4 |
| starch-binding associating with outer membrane | SAMN05421820_103319 | Not Available | Negative | 2387764 - 2389272 | 55925.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_103320 | Not Available | Negative | 2389284 - 2392433 | 114703.0 |
| 4-o-beta-d-mannosyl-d-glucose phosphorylase | SAMN05421820_103321 | Not Available | Negative | 2392514 - 2393698 | 44866.3 |
| na+/proline symporter | SAMN05421820_103322 | Not Available | Negative | 2393723 - 2395552 | 68579.2 |
| arac-type dna-binding protein | SAMN05421820_103323 | Not Available | Positive | 2395716 - 2396594 | 34016.7 |
| hypothetical protein | SAMN05421820_103324 | Not Available | Positive | 2396716 - 2396871 | 5583.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

