Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase, class iv | SAMN05421820_103305 | Not Available | Negative | 2366264 - 2367412 | 42036.6 |
| glutamine synthetase | SAMN05421820_103306 | Not Available | Negative | 2367425 - 2368783 | 50822.8 |
| ethanolamine permease | SAMN05421820_103307 | Not Available | Negative | 2368780 - 2370096 | 47348.2 |
| starch-binding associating with outer membrane | SAMN05421820_103308 | Not Available | Negative | 2370139 - 2371701 | 58466.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_103309 | Not Available | Negative | 2371736 - 2375125 | 126598.0 |
| protein of unknown function | SAMN05421820_103310 | Not Available | Negative | 2375350 - 2376471 | 41669.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_103311 | Not Available | Negative | 2376545 - 2377138 | 22659.3 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421820_103312 | Not Available | Positive | 2377395 - 2382599 | 181808.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN05421820_103313 | Not Available | Positive | 2382611 - 2383522 | 33182.4 |
| stress responsive a/b barrel domain | SAMN05421820_103314 | Not Available | Positive | 2383888 - 2384184 | 11245.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

