Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_101184 | Not Available | Negative | 235748 - 236389 | 23849.8 |
| cyclopropane-fatty-acyl-phospholipid synthase | SAMN05421820_101185 | Not Available | Positive | 236510 - 237619 | 43700.4 |
| nucleotide-binding universal stress protein, uspa family | SAMN05421820_101186 | Not Available | Negative | 237646 - 238494 | 32009.8 |
| l,d-transpeptidase catalytic domain | SAMN05421820_101187 | Not Available | Positive | 238692 - 240278 | 60067.7 |
| putative membrane protein | SAMN05421820_101188 | Not Available | Negative | 240268 - 240840 | 20668.1 |
| hypothetical protein | SAMN05421820_101189 | Not Available | Positive | 241041 - 241712 | 25706.7 |
| low affinity fe/cu permease | SAMN05421820_101190 | Not Available | Positive | 241749 - 242282 | 19805.7 |
| choline dehydrogenase | SAMN05421820_101191 | Not Available | Positive | 242422 - 244158 | 63334.8 |
| gluconate 2-dehydrogenase subunit 3 | SAMN05421820_101192 | Not Available | Positive | 244180 - 244806 | 23254.0 |
| ankyrin repeat | SAMN05421820_101193 | Not Available | Negative | 244862 - 246208 | 48857.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

