Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN05421820_103275 | Not Available | Positive | 2339494 - 2340633 | 41846.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN05421820_103276 | Not Available | Positive | 2340636 - 2341889 | 45349.5 |
| chorismate synthase | SAMN05421820_103277 | Not Available | Positive | 2341916 - 2343010 | 39086.5 |
| pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (e1) component | SAMN05421820_103278 | Not Available | Negative | 2343078 - 2345501 | 89739.6 |
| protein of unknown function | SAMN05421820_103279 | Not Available | Positive | 2345634 - 2346026 | 14046.2 |
| aspartate aminotransferase | SAMN05421820_103280 | Not Available | Positive | 2346119 - 2347291 | 43360.0 |
| Tmrna,resume consensus sequence (at 89): tataattggcgaaaataa | Not Available | Not Available | Positive | 2347321 - 2347685 | Not Available |
| hypothetical protein | SAMN05421820_103282 | Not Available | Positive | 2347773 - 2348180 | 15657.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_103283 | Not Available | Positive | 2348366 - 2348971 | 23344.6 |
| fecr protein | SAMN05421820_103284 | Not Available | Positive | 2349050 - 2350240 | 44471.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

