Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN05421820_103245 | Not Available | Negative | 2305447 - 2307885 | 91877.9 |
| histidine kinase | SAMN05421820_103246 | Not Available | Positive | 2308192 - 2309298 | 42419.1 |
| two-component system, lytt family, response regulator | SAMN05421820_103247 | Not Available | Positive | 2309273 - 2310031 | 29896.2 |
| cupin domain-containing protein | SAMN05421820_103248 | Not Available | Positive | 2310254 - 2310640 | 14231.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_103249 | Not Available | Positive | 2311299 - 2311868 | 22414.5 |
| protein of unknown function | SAMN05421820_103250 | Not Available | Positive | 2311963 - 2313147 | 42994.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_103251 | Not Available | Positive | 2313351 - 2317040 | 137157.0 |
| susd family protein | SAMN05421820_103252 | Not Available | Positive | 2317053 - 2318516 | 54306.4 |
| substrate import-associated zinc metallohydrolase lipoprotein | SAMN05421820_103253 | Not Available | Positive | 2318527 - 2319906 | 51977.7 |
| protein of unknown function | SAMN05421820_103254 | Not Available | Positive | 2319923 - 2321269 | 49426.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

