Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix | SAMN05421820_103235 | Not Available | Negative | 2296915 - 2297127 | 8366.24 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05421820_103236 | Not Available | Positive | 2297666 - 2299006 | 51345.9 |
| two-component system, unclassified family, response regulator | SAMN05421820_103237 | Not Available | Positive | 2299016 - 2299456 | 16301.7 |
| pas domain s-box-containing protein | SAMN05421820_103238 | Not Available | Positive | 2299472 - 2300998 | 57534.2 |
| hypothetical protein | SAMN05421820_103239 | Not Available | Negative | 2301018 - 2301545 | 20181.3 |
| hypothetical protein | SAMN05421820_103240 | Not Available | Negative | 2301585 - 2301908 | 11577.7 |
| protein of unknown function | SAMN05421820_103241 | Not Available | Negative | 2302088 - 2302588 | 18425.0 |
| thioredoxin reductase | SAMN05421820_103242 | Not Available | Negative | 2302594 - 2303652 | 38227.8 |
| arac-type dna-binding protein | SAMN05421820_103243 | Not Available | Negative | 2303761 - 2304717 | 37445.8 |
| acetyltransferase (gnat) family protein | SAMN05421820_103244 | Not Available | Negative | 2304796 - 2305407 | 23609.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

