Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase | SAMN05421820_103205 | Not Available | Negative | 2260620 - 2261807 | 44959.9 |
| hypothetical protein | SAMN05421820_103206 | Not Available | Negative | 2261813 - 2262898 | 43013.0 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN05421820_103207 | Not Available | Negative | 2262895 - 2263491 | 23023.4 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05421820_103208 | Not Available | Negative | 2263504 - 2264745 | 46082.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_103209 | Not Available | Negative | 2264803 - 2265906 | 41346.7 |
| glycosyl transferase family 2 | SAMN05421820_103210 | Not Available | Negative | 2265917 - 2266822 | 35296.9 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05421820_103211 | Not Available | Negative | 2266806 - 2267972 | 43792.0 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421820_103212 | Not Available | Negative | 2267969 - 2269411 | 54462.3 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05421820_103213 | Not Available | Negative | 2269441 - 2270448 | 39421.3 |
| udp-n-acetyl-d-galactosamine dehydrogenase | SAMN05421820_103214 | Not Available | Negative | 2270508 - 2271806 | 48191.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

