Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase | SAMN05421820_101174 | Not Available | Negative | 227578 - 229029 | 55166.2 |
| hypothetical protein | SAMN05421820_101175 | Not Available | Negative | 229040 - 229954 | 33420.5 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05421820_101176 | Not Available | Negative | 230095 - 230559 | 17013.7 |
| s-formylglutathione hydrolase frmb | SAMN05421820_101177 | Not Available | Negative | 230556 - 231380 | 31368.6 |
| monovalent cation:h+ antiporter, cpa1 family | SAMN05421820_101178 | Not Available | Negative | 231458 - 233065 | 59987.7 |
| hypothetical protein | SAMN05421820_101179 | Not Available | Negative | 233107 - 233820 | 27616.1 |
| protein of unknown function | SAMN05421820_101180 | Not Available | Negative | 233899 - 234108 | 8348.87 |
| hypothetical protein | SAMN05421820_101181 | Not Available | Negative | 234275 - 234436 | 5976.28 |
| hypothetical protein | SAMN05421820_101182 | Not Available | Negative | 234512 - 234688 | 6219.71 |
| ferritin-like metal-binding protein ycie | SAMN05421820_101183 | Not Available | Positive | 234872 - 235390 | 19038.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

