Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) domain-containing protein | SAMN05421820_103195 | Not Available | Negative | 2248466 - 2249491 | 39879.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_103196 | Not Available | Negative | 2249505 - 2250653 | 43613.7 |
| pectate lyase | SAMN05421820_103197 | Not Available | Negative | 2250813 - 2252171 | 48321.7 |
| udp-glucuronate 4-epimerase | SAMN05421820_103198 | Not Available | Negative | 2252650 - 2253744 | 41513.8 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05421820_103199 | Not Available | Negative | 2253782 - 2255617 | 69933.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_103200 | Not Available | Negative | 2255620 - 2256687 | 40013.2 |
| rimk-like atp-grasp domain-containing protein | SAMN05421820_103201 | Not Available | Negative | 2256684 - 2257571 | 34929.8 |
| hypothetical protein | SAMN05421820_103202 | Not Available | Negative | 2257675 - 2258277 | 23289.3 |
| histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase | SAMN05421820_103203 | Not Available | Negative | 2258261 - 2259463 | 46367.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_103204 | Not Available | Negative | 2259488 - 2260627 | 43301.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

