Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family | SAMN05421820_103185 | Not Available | Negative | 2238940 - 2239503 | 21801.1 |
| pp_01845 | SAMN05421820_103186 | Not Available | Negative | 2239586 - 2240167 | Not Available |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_103187 | Not Available | Positive | 2240256 - 2241494 | 47227.9 |
| hypothetical protein | SAMN05421820_103188 | Not Available | Negative | 2241498 - 2241842 | 13729.6 |
| pas fold-containing protein | SAMN05421820_103189 | Not Available | Negative | 2242109 - 2242780 | 25475.8 |
| hypothetical protein | SAMN05421820_103190 | Not Available | Negative | 2242867 - 2243037 | 6229.43 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN05421820_103191 | Not Available | Negative | 2243148 - 2245100 | 74086.3 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421820_103192 | Not Available | Negative | 2245127 - 2246668 | 58835.4 |
| hypothetical protein | SAMN05421820_103193 | Not Available | Negative | 2246665 - 2247615 | 37092.9 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN05421820_103194 | Not Available | Negative | 2247638 - 2248441 | 30957.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

