Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN05421820_103115 | Not Available | Negative | 2155714 - 2156184 | 17956.2 |
| dtxr family transcriptional regulator, mn-dependent transcriptional regulator | SAMN05421820_103116 | Not Available | Positive | 2156324 - 2156977 | 24718.9 |
| manganese transport protein | SAMN05421820_103117 | Not Available | Positive | 2156979 - 2158838 | 68149.5 |
| ssra-binding protein | SAMN05421820_103118 | Not Available | Positive | 2158955 - 2159404 | 17561.4 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN05421820_103119 | Not Available | Negative | 2159406 - 2160062 | 24654.8 |
| replication restart dna helicase pria | SAMN05421820_103120 | Not Available | Negative | 2160149 - 2162629 | 94401.2 |
| uncharacterized membrane protein ygdd, tmem256/duf423 family | SAMN05421820_103121 | Not Available | Negative | 2162629 - 2163018 | 14262.9 |
| hypothetical protein | SAMN05421820_103122 | Not Available | Positive | 2163186 - 2164748 | 59591.3 |
| hypothetical protein | SAMN05421820_103123 | Not Available | Positive | 2164805 - 2166205 | 52061.7 |
| hypothetical protein | SAMN05421820_103124 | Not Available | Negative | 2166248 - 2166541 | 11460.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

