Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix | SAMN05421820_10395 | Not Available | Negative | 2136232 - 2136561 | 12557.2 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | SAMN05421820_10396 | Not Available | Negative | 2136602 - 2137957 | 50603.8 |
| ribosomal protein l11 methyltransferase | SAMN05421820_10397 | Not Available | Negative | 2138001 - 2138840 | 31514.1 |
| triosephosphate isomerase (tim) | SAMN05421820_10398 | Not Available | Negative | 2138840 - 2139604 | 27577.8 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | SAMN05421820_10399 | Not Available | Negative | 2139670 - 2140836 | 43076.1 |
| large subunit ribosomal protein l31 | SAMN05421820_103100 | Not Available | Negative | 2140908 - 2141156 | 9763.63 |
| hypothetical protein | SAMN05421820_103101 | Not Available | Negative | 2141251 - 2141538 | 11086.3 |
| methylmalonyl-coa/ethylmalonyl-coa epimerase | SAMN05421820_103102 | Not Available | Negative | 2141538 - 2141945 | 14968.0 |
| cysteine desulfurase iscs | SAMN05421820_103103 | Not Available | Positive | 2142071 - 2143282 | 44250.1 |
| nitrogen fixation protein nifu | SAMN05421820_103104 | Not Available | Positive | 2143349 - 2143762 | 14864.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

