Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_10335 | Not Available | Positive | 2073130 - 2073243 | 4362.28 |
| lyttr dna-binding domain-containing protein | SAMN05421820_10336 | Not Available | Negative | 2073198 - 2073524 | 12803.5 |
| acetyltransferase (gnat) family protein | SAMN05421820_10337 | Not Available | Negative | 2073638 - 2074171 | 20401.5 |
| hypothetical protein | SAMN05421820_10338 | Not Available | Positive | 2074297 - 2074410 | 4508.54 |
| hypothetical protein | SAMN05421820_10339 | Not Available | Positive | 2074411 - 2074668 | 9494.19 |
| ribonuclease r | SAMN05421820_10340 | Not Available | Positive | 2074740 - 2076869 | 80615.4 |
| geranylgeranyl diphosphate synthase, type ii | SAMN05421820_10341 | Not Available | Positive | 2076907 - 2077875 | 36008.2 |
| response regulator receiver domain-containing protein | SAMN05421820_10342 | Not Available | Negative | 2077927 - 2078889 | 36995.8 |
| hypothetical protein | SAMN05421820_10343 | Not Available | Negative | 2078879 - 2078977 | 3619.45 |
| transcriptional regulator, contains xre-family hth domain | SAMN05421820_10344 | Not Available | Positive | 2079097 - 2079462 | 13902.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

