Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_101154 | Not Available | Negative | 204991 - 205242 | 9314.55 |
| catechol 2,3-dioxygenase | SAMN05421820_101155 | Not Available | Negative | 205319 - 205753 | 16476.5 |
| catechol-2,3-dioxygenase | SAMN05421820_101156 | Not Available | Positive | 205922 - 206578 | 24898.2 |
| signal transduction histidine kinase | SAMN05421820_101157 | Not Available | Negative | 206582 - 207904 | 49633.3 |
| two-component system, chemotaxis family, cheb/cher fusion protein | SAMN05421820_101158 | Not Available | Positive | 207991 - 209913 | 73429.8 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05421820_101159 | Not Available | Negative | 209915 - 211303 | 49204.8 |
| dna-binding transcriptional regulator, lrp family | SAMN05421820_101160 | Not Available | Positive | 211427 - 211918 | 18650.8 |
| hypothetical protein | SAMN05421820_101161 | Not Available | Positive | 211988 - 212719 | 28166.1 |
| nadp-dependent alcohol dehydrogenase | SAMN05421820_101162 | Not Available | Positive | 212809 - 213969 | 42490.2 |
| hypothetical protein | SAMN05421820_101163 | Not Available | Positive | 214002 - 214112 | 4119.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

