Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel domain-containing protein | SAMN05421820_102771 | Not Available | Negative | 2008385 - 2008954 | 20069.8 |
| hypothetical protein | SAMN05421820_102772 | Not Available | Negative | 2009145 - 2009342 | 7218.63 |
| fecr protein | SAMN05421820_102773 | Not Available | Positive | 2009502 - 2010650 | 42077.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_102774 | Not Available | Positive | 2010706 - 2011275 | 22251.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102775 | Not Available | Positive | 2011538 - 2014978 | 125577.0 |
| starch-binding associating with outer membrane | SAMN05421820_102776 | Not Available | Positive | 2014989 - 2016506 | 55805.1 |
| hypothetical protein | SAMN05421820_102777 | Not Available | Positive | 2016601 - 2016975 | 14034.8 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421820_102778 | Not Available | Negative | 2017051 - 2019228 | 81539.8 |
| carbonic anhydrase | SAMN05421820_102779 | Not Available | Negative | 2019364 - 2019984 | 22813.5 |
| uncharacterized membrane protein yqik, contains band7/phb/spfh domain | SAMN05421820_102780 | Not Available | Negative | 2019990 - 2021903 | 70084.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

