Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421820_102761 | Not Available | Positive | 1994595 - 1995434 | 29984.6 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05421820_102762 | Not Available | Positive | 1995558 - 1996766 | 44567.7 |
| galactose mutarotase | SAMN05421820_102763 | Not Available | Negative | 1996763 - 1997629 | 33281.2 |
| hypothetical protein | SAMN05421820_102764 | Not Available | Positive | 1997655 - 2000042 | 90766.8 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05421820_102765 | Not Available | Negative | 2000111 - 2001529 | 51512.1 |
| hydrophobe/amphiphile efflux-1 (hae1) family protein | SAMN05421820_102766 | Not Available | Negative | 2001532 - 2004687 | 114354.0 |
| membrane fusion protein, multidrug efflux system | SAMN05421820_102767 | Not Available | Negative | 2004712 - 2005899 | 42474.1 |
| two-component system, lytt family, response regulator | SAMN05421820_102768 | Not Available | Negative | 2006045 - 2006803 | 29108.3 |
| histidine kinase | SAMN05421820_102769 | Not Available | Negative | 2006840 - 2007934 | 42025.1 |
| hypothetical protein | SAMN05421820_102770 | Not Available | Negative | 2007967 - 2008305 | 13267.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

