Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | SAMN05421820_102751 | Not Available | Positive | 1981570 - 1982838 | 47387.1 |
| hypothetical protein | SAMN05421820_102752 | Not Available | Positive | 1982840 - 1983469 | 24029.8 |
| putative phosphoesterase, sbcd/mre11-related/metallophosphoesterase, dna ligase-associated | SAMN05421820_102753 | Not Available | Negative | 1983483 - 1984118 | 23800.8 |
| atp-dependent helicase lhr and lhr-like helicase | SAMN05421820_102754 | Not Available | Negative | 1984102 - 1986642 | 96119.0 |
| dna ligase-1 | SAMN05421820_102755 | Not Available | Negative | 1986649 - 1988241 | 60484.5 |
| putative mrna 3-end processing factor | SAMN05421820_102756 | Not Available | Negative | 1988238 - 1989278 | 38504.9 |
| tonb-dependent receptor plug domain | SAMN05421820_102757 | Not Available | Positive | 1989393 - 1991720 | 87342.7 |
| protein of unknown function | SAMN05421820_102758 | Not Available | Positive | 1991744 - 1992550 | 29412.0 |
| thioredoxin reductase | SAMN05421820_102759 | Not Available | Positive | 1992663 - 1993571 | 32908.6 |
| arac-type dna-binding protein | SAMN05421820_102760 | Not Available | Positive | 1993610 - 1994512 | 35168.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

