Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)alamin adenosyltransferase | SAMN05421820_102741 | Not Available | Positive | 1973717 - 1974265 | 20857.4 |
| protein of unknown function | SAMN05421820_102742 | Not Available | Positive | 1974351 - 1974572 | 8587.66 |
| hypothetical protein | SAMN05421820_102743 | Not Available | Positive | 1974772 - 1974933 | 5737.54 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN05421820_102744 | Not Available | Negative | 1974973 - 1975647 | 24802.1 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN05421820_102745 | Not Available | Negative | 1975734 - 1976840 | 42194.1 |
| hypothetical protein | SAMN05421820_102746 | Not Available | Negative | 1976858 - 1977007 | 5492.92 |
| putative abc transport system permease protein | SAMN05421820_102747 | Not Available | Positive | 1977092 - 1978333 | 45638.7 |
| aspartate aminotransferase | SAMN05421820_102748 | Not Available | Negative | 1978833 - 1980026 | 43887.3 |
| cation diffusion facilitator family transporter | SAMN05421820_102749 | Not Available | Positive | 1980141 - 1981136 | 36992.3 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05421820_102750 | Not Available | Positive | 1981133 - 1981573 | 16759.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

