Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | SAMN05421820_102681 | Not Available | Positive | 1894217 - 1896670 | 92933.3 |
| alpha-l-fucosidase 2 | SAMN05421820_102682 | Not Available | Positive | 1896680 - 1899250 | 96112.2 |
| alpha-d-xyloside xylohydrolase | SAMN05421820_102683 | Not Available | Positive | 1899256 - 1901400 | 80267.5 |
| alginate lyase | SAMN05421820_102684 | Not Available | Positive | 1901405 - 1902568 | 44001.2 |
| alpha-l-fucosidase | SAMN05421820_102685 | Not Available | Positive | 1902599 - 1904479 | 70065.4 |
| glycosyl hydrolase family 88 | SAMN05421820_102686 | Not Available | Positive | 1904520 - 1905704 | 44928.4 |
| polysaccharide lyase | SAMN05421820_102687 | Not Available | Positive | 1905782 - 1906546 | 27715.8 |
| alpha-l-fucosidase | SAMN05421820_102688 | Not Available | Positive | 1906657 - 1908093 | 53470.7 |
| poly(beta-d-mannuronate) lyase | SAMN05421820_102689 | Not Available | Positive | 1908101 - 1909429 | 49291.6 |
| pectate lyase superfamily protein | SAMN05421820_102690 | Not Available | Positive | 1909525 - 1911060 | 57206.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

