Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | SAMN05421820_102671 | Not Available | Positive | 1873318 - 1874913 | 61183.8 |
| protein of unknown function | SAMN05421820_102672 | Not Available | Positive | 1875042 - 1877729 | 101129.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102673 | Not Available | Positive | 1877766 - 1881125 | 123984.0 |
| susd family protein | SAMN05421820_102674 | Not Available | Positive | 1881137 - 1882462 | 49737.1 |
| dna-binding response regulator, lytr/algr family | SAMN05421820_102675 | Not Available | Positive | 1882559 - 1883314 | 28958.0 |
| two component regulator propeller | SAMN05421820_102676 | Not Available | Positive | 1883397 - 1887473 | 154883.0 |
| arac-type dna-binding protein | SAMN05421820_102677 | Not Available | Positive | 1887691 - 1888563 | 33552.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102678 | Not Available | Positive | 1888756 - 1891893 | 116344.0 |
| starch-binding associating with outer membrane | SAMN05421820_102679 | Not Available | Positive | 1891898 - 1893448 | 58377.6 |
| hypothetical protein | SAMN05421820_102680 | Not Available | Positive | 1893459 - 1894220 | 28832.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

