Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system membrane protein, porp/sprf family | SAMN05421820_102651 | Not Available | Positive | 1846383 - 1847423 | 38890.5 |
| outer membrane protein ompa | SAMN05421820_102652 | Not Available | Positive | 1847435 - 1849414 | 73136.6 |
| hypothetical protein | SAMN05421820_102653 | Not Available | Negative | 1849479 - 1849730 | 9899.1 |
| gntr family transcriptional regulator | SAMN05421820_102654 | Not Available | Negative | 1849756 - 1850487 | 28061.9 |
| hypothetical protein | SAMN05421820_102655 | Not Available | Negative | 1850484 - 1850633 | 5842.27 |
| mannose-6-phosphate isomerase, class i | SAMN05421820_102656 | Not Available | Positive | 1850664 - 1852499 | 70166.5 |
| hypothetical protein | SAMN05421820_102657 | Not Available | Negative | 1852523 - 1853401 | 33222.8 |
| outer membrane protein ompa | SAMN05421820_102658 | Not Available | Positive | 1853641 - 1855014 | 47964.5 |
| trans-aconitate 2-methyltransferase | SAMN05421820_102659 | Not Available | Positive | 1855080 - 1855844 | 28874.7 |
| quinol monooxygenase ygin | SAMN05421820_102660 | Not Available | Negative | 1855852 - 1856142 | 11096.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

