Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421820_102641 | Not Available | Positive | 1825987 - 1826766 | 29636.7 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN05421820_102642 | Not Available | Positive | 1826759 - 1827208 | 17207.5 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421820_102643 | Not Available | Positive | 1827290 - 1827874 | 22745.5 |
| polyisoprenoid-binding protein ycei | SAMN05421820_102644 | Not Available | Positive | 1827946 - 1828464 | 18624.0 |
| 4-oxalocrotonate tautomerase | SAMN05421820_102645 | Not Available | Positive | 1828493 - 1828711 | 8067.78 |
| short-chain dehydrogenase | SAMN05421820_102646 | Not Available | Positive | 1828723 - 1829457 | 25589.8 |
| putative lumazine-binding | SAMN05421820_102647 | Not Available | Positive | 1829460 - 1829831 | 13958.8 |
| nitronate monooxygenase | SAMN05421820_102648 | Not Available | Positive | 1829836 - 1830921 | 39213.2 |
| signal transduction histidine kinase | SAMN05421820_102649 | Not Available | Negative | 1830875 - 1833877 | 114746.0 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421820_102650 | Not Available | Positive | 1834105 - 1846404 | 423168.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

