Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polygalacturonase | SAMN05421820_102621 | Not Available | Positive | 1792527 - 1794125 | 58823.7 |
| alpha-glucosidase | SAMN05421820_102622 | Not Available | Positive | 1794134 - 1796074 | 73777.4 |
| rhamnogalacturonyl hydrolase yesr | SAMN05421820_102623 | Not Available | Positive | 1796085 - 1797194 | 42505.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_102624 | Not Available | Positive | 1797353 - 1797940 | 22947.0 |
| fecr protein | SAMN05421820_102625 | Not Available | Positive | 1798017 - 1799132 | 41392.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102626 | Not Available | Positive | 1799249 - 1802632 | 124403.0 |
| starch-binding associating with outer membrane | SAMN05421820_102627 | Not Available | Positive | 1802643 - 1804115 | 54464.9 |
| peroxiredoxin | SAMN05421820_102628 | Not Available | Positive | 1804151 - 1805269 | 41805.1 |
| predicted zn-dependent peptidase | SAMN05421820_102629 | Not Available | Positive | 1805332 - 1806645 | 49583.3 |
| predicted zn-dependent peptidase | SAMN05421820_102630 | Not Available | Positive | 1806648 - 1808063 | 50682.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

