Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05421820_102611 | Not Available | Negative | 1775464 - 1776906 | 52570.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102612 | Not Available | Negative | 1776917 - 1780261 | 121364.0 |
| protein of unknown function | SAMN05421820_102613 | Not Available | Negative | 1780415 - 1781653 | 45754.1 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421820_102614 | Not Available | Positive | 1781817 - 1782860 | 39115.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_102615 | Not Available | Positive | 1783075 - 1783644 | 22591.4 |
| fecr protein | SAMN05421820_102616 | Not Available | Positive | 1783765 - 1784880 | 41610.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102617 | Not Available | Positive | 1785009 - 1788371 | 124486.0 |
| starch-binding associating with outer membrane | SAMN05421820_102618 | Not Available | Positive | 1788389 - 1790206 | 68519.6 |
| suse outer membrane protein | SAMN05421820_102619 | Not Available | Positive | 1790229 - 1791362 | 41119.6 |
| predicted alpha-1,6-mannanase, gh76 family | SAMN05421820_102620 | Not Available | Positive | 1791370 - 1792521 | 43506.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

