Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102601 | Not Available | Positive | 1756238 - 1759828 | 131362.0 |
| susd family protein | SAMN05421820_102602 | Not Available | Positive | 1759847 - 1761340 | 55520.5 |
| abc-2 type transport system atp-binding protein | SAMN05421820_102603 | Not Available | Positive | 1761445 - 1762380 | 34902.2 |
| abc-2 type transport system permease protein | SAMN05421820_102604 | Not Available | Positive | 1762380 - 1765205 | 104194.0 |
| muts domain iii | SAMN05421820_102605 | Not Available | Positive | 1765217 - 1766548 | 50101.9 |
| muts domain iii | SAMN05421820_102606 | Not Available | Positive | 1766545 - 1767864 | 49084.9 |
| peroxiredoxin | SAMN05421820_102607 | Not Available | Positive | 1767924 - 1769060 | 41821.6 |
| zinc protease | SAMN05421820_102608 | Not Available | Positive | 1769080 - 1771863 | 104428.0 |
| rna polymerase sigma-70 factor, bacteroides expansion family 1 | SAMN05421820_102609 | Not Available | Positive | 1772186 - 1772767 | 22535.6 |
| protein of unknown function | SAMN05421820_102610 | Not Available | Negative | 1772880 - 1775390 | 94666.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

