Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05421820_101134 | Not Available | Positive | 186430 - 188238 | 68216.9 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05421820_101135 | Not Available | Positive | 188274 - 189116 | 31692.5 |
| tetr/acrr family transcriptional regulator, transcriptional repressor for nem operon | SAMN05421820_101136 | Not Available | Positive | 189350 - 189934 | 21605.3 |
| predicted arabinose efflux permease, mfs family | SAMN05421820_101137 | Not Available | Positive | 190027 - 191208 | 41678.8 |
| barstar, rnase (barnase) inhibitor | SAMN05421820_101138 | Not Available | Negative | 191198 - 191488 | 11097.2 |
| hypothetical protein | SAMN05421820_101139 | Not Available | Positive | 192017 - 192325 | 11904.2 |
| abc-type lipopolysaccharide export system, atpase component | SAMN05421820_101140 | Not Available | Positive | 192322 - 192984 | 24805.2 |
| tonb family c-terminal domain-containing protein | SAMN05421820_101141 | Not Available | Positive | 193040 - 194002 | 36533.2 |
| rhomboid protease glup | SAMN05421820_101142 | Not Available | Positive | 194171 - 195640 | 54681.7 |
| protein of unknown function duf72 | SAMN05421820_101143 | Not Available | Negative | 195643 - 196098 | 17944.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

