Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN05421820_102581 | Not Available | Positive | 1734289 - 1734792 | 19056.6 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421820_102582 | Not Available | Positive | 1735121 - 1737517 | 88361.1 |
| hypothetical protein | SAMN05421820_102583 | Not Available | Positive | 1737795 - 1738466 | 24946.2 |
| magnesium transporter | SAMN05421820_102584 | Not Available | Negative | 1738467 - 1739363 | 35305.4 |
| dna-binding transcriptional regulator, hxlr family | SAMN05421820_102585 | Not Available | Negative | 1739537 - 1739890 | 13345.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421820_102586 | Not Available | Positive | 1739985 - 1740608 | 21980.8 |
| hypothetical protein | SAMN05421820_102587 | Not Available | Negative | 1740808 - 1742157 | 51366.4 |
| f5/8 type c domain-containing protein | SAMN05421820_102588 | Not Available | Positive | 1742593 - 1744155 | 57526.6 |
| protein of unknown function | SAMN05421820_102589 | Not Available | Positive | 1744184 - 1745551 | 50731.1 |
| oxidoreductase family, nad-binding rossmann fold | SAMN05421820_102590 | Not Available | Positive | 1745596 - 1747026 | 52938.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

