Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm repeat-containing protein | SAMN05421820_102521 | Not Available | Negative | 1672585 - 1673859 | 46401.5 |
| starvation-inducible dna-binding protein | SAMN05421820_102522 | Not Available | Positive | 1674043 - 1674522 | 18425.1 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN05421820_102523 | Not Available | Positive | 1674624 - 1676438 | 66795.2 |
| outer membrane protein transport protein (ompp1/fadl/todx) | SAMN05421820_102524 | Not Available | Negative | 1676508 - 1677995 | 54328.1 |
| hypothetical protein | SAMN05421820_102525 | Not Available | Negative | 1678106 - 1679083 | 35320.3 |
| prolyl-trna synthetase | SAMN05421820_102526 | Not Available | Positive | 1679188 - 1680660 | 55617.2 |
| hypothetical protein | SAMN05421820_102527 | Not Available | Positive | 1680704 - 1681399 | 26611.8 |
| cystathionine gamma-lyase/cystathionine beta-lyase | SAMN05421820_102528 | Not Available | Positive | 1681396 - 1682535 | 42030.5 |
| tigr02757 family protein | SAMN05421820_102529 | Not Available | Positive | 1682542 - 1683399 | 33629.3 |
| bacteriocin-protection, ydei or ompd-associated | SAMN05421820_102530 | Not Available | Positive | 1683608 - 1684123 | 19705.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

