Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate kinase | SAMN05421820_102511 | Not Available | Negative | 1663033 - 1664310 | 48246.3 |
| protein of unknown function | SAMN05421820_102512 | Not Available | Negative | 1664313 - 1665128 | 30185.9 |
| l-amino acid n-acyltransferase ynca | SAMN05421820_102513 | Not Available | Negative | 1665187 - 1665654 | 17915.2 |
| hypothetical protein | SAMN05421820_102514 | Not Available | Negative | 1665654 - 1666346 | 25921.4 |
| protein of unknown function | SAMN05421820_102515 | Not Available | Positive | 1666418 - 1666921 | 18784.1 |
| dna mismatch repair protein muts2 | SAMN05421820_102516 | Not Available | Positive | 1666930 - 1669302 | 89511.7 |
| dehydrogenase, pqq-dependent, s-gdh family | SAMN05421820_102517 | Not Available | Positive | 1669352 - 1670449 | 39549.0 |
| 3-oxoacid coa-transferase subunit a | SAMN05421820_102518 | Not Available | Positive | 1670498 - 1671199 | 25360.5 |
| 3-oxoacid coa-transferase subunit b | SAMN05421820_102519 | Not Available | Positive | 1671217 - 1671876 | 23294.6 |
| uridine kinase | SAMN05421820_102520 | Not Available | Negative | 1671945 - 1672595 | 25060.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

