Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_102501 | Not Available | Positive | 1641118 - 1641687 | 22199.6 |
| fecr protein | SAMN05421820_102502 | Not Available | Positive | 1641789 - 1642937 | 42733.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102503 | Not Available | Positive | 1643125 - 1646607 | 128457.0 |
| starch-binding associating with outer membrane | SAMN05421820_102504 | Not Available | Positive | 1646618 - 1648342 | 64359.5 |
| melibiase | SAMN05421820_102505 | Not Available | Positive | 1648468 - 1651017 | 96771.0 |
| alpha-n-acetylglucosaminidase | SAMN05421820_102506 | Not Available | Positive | 1651028 - 1653292 | 86537.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_102507 | Not Available | Positive | 1653587 - 1656850 | 119626.0 |
| starch-binding associating with outer membrane | SAMN05421820_102508 | Not Available | Positive | 1656863 - 1658617 | 64534.6 |
| protein of unknown function | SAMN05421820_102509 | Not Available | Negative | 1658723 - 1661728 | 113154.0 |
| hypothetical protein | SAMN05421820_102510 | Not Available | Negative | 1661840 - 1663021 | 44625.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

